Search results for " Organism"

showing 10 items of 541 documents

Symbolic use of marine shells and mineral pigments by Iberian Neandertals 115,000 years ago.

2018

U-Th dating of archaeological deposits of Cueva de los Aviones provides evidence for Neandertal symbolism 115,000 years ago.

010506 paleontologyAquatic OrganismsMinerals060101 anthropologyMultidisciplinaryTime FactorsSciAdv r-articles06 humanities and the arts01 natural sciencesArchaeologyGeographyAnimal ShellsSpainMiddle PaleolithicAnthropologyAnimals0601 history and archaeologyThe SymbolicMiddle Stone AgeSymbolic behaviorResearch Articles0105 earth and related environmental sciencesAncestorNeanderthalsResearch ArticleScience advances
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Growth patterns and life-history strategies in Placodontia (Diapsida: Sauropterygia)

2015

Placodontia is a clade of durophagous, near shore marine reptiles from Triassic sediments of modern-day Europe, Middle East and China. Although much is known about their primary anatomy and palaeoecology, relatively little has been published regarding their life history, i.e. ageing, maturation and growth. Here, growth records derived from long bone histological data of placodont individuals are described and modelled to assess placodont growth and life-history strategies. Growth modelling methods are used to confirm traits documented in the growth record (age at onset of sexual maturity, age when asymptotic length was achieved, age at death, maximum longevity) and also to estimate undocum…

0106 biological sciences010506 paleontology1005non-annual rest linesmedia_common.quotation_subjectlogistic growth modelvon bertalanffy growth modelZoologygrowth record10125 Paleontological Institute and Museum010603 evolutionary biology01 natural sciencesLife history theorygrowth marksSexual maturityPlacodontlcsh:Science0105 earth and related environmental sciencesmedia_common1000 MultidisciplinaryMultidisciplinarybiologyEcologyLongevityBiology (Whole Organism)biology.organism_classification144SauropterygiaSexual dimorphismTaxon560 Fossils & prehistoric lifePaleoecologylcsh:QResearch ArticleRoyal Society Open Science
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Characterization of recruitment through tandem running in an Indian queenless ant Diacamma indicum

2017

Tandem running is a primitive recruitment method employed by many ant genera. This study characterizes this behaviour during the recruitment of colony mates to a new nest in an Indian antDiacamma indicum. Tandem leaders who have knowledge of the new nest lead a single follower at a time, to the destination by maintaining physical contact. In order to characterize tandem running, we captured and analysed 621 invitations, 217 paths and 226 termination events. Remarkably, not a single colony member was lost. While invitations were stereotypic in behaviour, termination was not. Analysis of speed revealed that the average transport speed was 4.2 cm s−1. Coupled adult-brood transport was slower t…

0106 biological sciences0301 basic medicine100160010603 evolutionary biology01 natural sciences03 medical and health sciencesNestDiacamma indicumlcsh:ScienceMultidisciplinarybiologyEcologycommunicationdirect recruitmentDiacamma indicum70Biology (Whole Organism)14tandem running speedbiology.organism_classificationANT030104 developmental biologyDiacammapath efficiencylcsh:QTandem runningResearch ArticleRoyal Society Open Science
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Potential risk evaluation for unintended entry of genetically modified plant Propagating material in Europe through import of seeds and animal feed –…

2019

Significant attention has been drawn to the adventitious and technically unavoidable presence of genetically modified (GM) organisms in the food and feed imported into the European Union (EU), while the potential presence of GM seeds in material for cultivation is less studied. Here we report a study from an EU member state, Latvia, during years 2017–2018 regarding monitoring for the presence of GM seeds in certified seed and animal feed material. Eighty-two and 28 samples of seeds intended for cultivation were analyzed in 2017 and 2018, respectively. One soybean sample contained MON40-3-2 soybean seeds (0.09 ± 0.01%) and one maize sample contained MON810 maize seeds (0.08 ± 0.01%). In addi…

0106 biological sciences0301 basic medicineAnimal feedFood Genetically ModifiedFood ContaminationGerminationGenetically modified cropsBiology01 natural sciencesZea mays03 medical and health sciencesmedia_common.cataloged_instanceAnimalsEuropean UnionEuropean unionmedia_commonbusiness.industryPotential riskPlants Genetically ModifiedAnimal FeedLatviaGenetically modified organismBiotechnology030104 developmental biologySeedsSoybeansbusinessAgronomy and Crop Science010606 plant biology & botanyFood ScienceBiotechnologyResearch Paper
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Parallel diversifications of Cremastosperma and mosannona (annonaceae), tropical rainforest trees tracking neogene upheaval of South America

2018

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phyloge…

0106 biological sciences0301 basic medicineDIVERSITY01 natural sciencesNiche modellingDISPERSALlcsh:ScienceMultidisciplinarybiologyEcologyAmazon rainforest70Biology (Whole Organism)ANDEAN UPLIFTPE&RCBiosystematieknicheGeographyGeodispersalinternationalISTHMUSMolecular datingCLADESPebas systemResearch Article1001Neotropics201004PHYLOGENY RECONSTRUCTIONRainforest010603 evolutionary biologymodelling03 medical and health sciencesHISTORICAL BIOGEOGRAPHYDIVERGENCEVicarianceSPECIATIONLaboratorium voor NematologieEcological nicheAndean orogenyAndean orogenyBiology and Life Sciencesbiology.organism_classificationEVOLUTION030104 developmental biologyMosannonaPanama isthmusBiosystematicslcsh:QEPSLaboratory of NematologyTropical rainforestRoyal Society Open Science
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Insect societies fight back: the evolution of defensive traits against social parasites

2018

Insect societies face many social parasites that exploit their altruistic behaviours or their resources. Due to the fitness costs these social parasites incur, hosts have evolved various behavioural, chemical, architectural and morphological defence traits. Similar to bacteria infecting multicellular hosts, social parasites have to successfully go through several steps to exploit their hosts. Here, we review how social insects try to interrupt this sequence of events. They can avoid parasite contact by choosing to nest in parasite-free locales or evade attacks by adapting their colony structure. Once social parasites attack, hosts attempt to detect them, which can be facilitated by adjustme…

0106 biological sciences0301 basic medicineInsectaExploitmedia_common.quotation_subjectInsectBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite Interactions03 medical and health sciencesNestAnimalsSocial BehaviorCoevolutionmedia_commonEcologyHost (biology)ReproductionfungiMultiple traitsfood and beveragesArticlesBiological EvolutionBroodAggressionMulticellular organism030104 developmental biologyGeneral Agricultural and Biological Sciences
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Evolutionary relationships between digeneans of the family Brachycladiidae Odhner, 1905 and their marine mammal hosts: A cophylogenetic study.

2016

Cophylogenetic studies examine the congruence between host and parasite phylogenies. There are few studies that quantify the relative contribution of coevolutionary events, i.e. duplication, loss, failure-to-diverge, host-switching and spreading in trophically-transmitted parasites at the marine realm. We addressed this issue in the Brachycladiidae, a cosmopolitan digenean family specific to marine mammals. We used, for the first time, distance-based and event-based methods to explicitly test the coevolutionary events that have shaped the current brachycladiid-marine mammal associations. Parasite phylogeny was constructed using mtDNA ND3 sequences of nine brachycladiid species, and host phy…

0106 biological sciences0301 basic medicineMitochondrial DNAAquatic OrganismsBiology010603 evolutionary biology01 natural sciencesDNA MitochondrialDigeneaHost-Parasite Interactions03 medical and health sciencesSpecies SpecificityPhylogeneticsAnimalsPhylogenyMammalsCytochrome bHost (biology)EcologySequence Analysis DNACytochromes bbiology.organism_classificationBiological Evolution030104 developmental biologyInfectious DiseasesTaxonEvolutionary biologyDelphinoideaParasitologyMammalTrematodaParasitology international
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Molecular signatures of silencing suppression degeneracy from a complex RNA virus

2021

As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…

0106 biological sciences0301 basic medicineProteomicsCitrusInteraction NetworksPathogenesisPlant Sciencemedicine.disease_causePathology and Laboratory Medicine01 natural sciencesInteractomeBiochemistryBimolecular fluorescence complementationRNA interferenceRNA silencing supressorsCitrus tristeza virusMedicine and Health SciencesDegeneracy (biology)Protein Interaction MapsBiology (General)H20 Plant diseasesPlant ProteinsEcologybiologyPlant virusesEukaryotaArgonautePlantsSmall interfering RNANucleic acidsRNA silencingComputational Theory and MathematicsGenetic interferenceExperimental Organism SystemsModeling and SimulationProteomeArgonaute ProteinsHost-Pathogen InteractionsRNA ViralEpigeneticsResearch ArticleClosterovirusRNA virusViral proteinQH301-705.5Arabidopsis ThalianaPlant PathogensComputational biologyGenome ViralBrassicaResearch and Analysis MethodsModels BiologicalPlant Viral Pathogens03 medical and health sciencesCellular and Molecular NeuroscienceViral ProteinsModel OrganismsPlant and Algal ModelsTobaccomedicineGeneticsGenomesNon-coding RNAProtein InteractionsMolecular signaturesMolecular BiologyEcology Evolution Behavior and SystematicsPlant DiseasesHost Microbial InteractionsBiology and life sciencesMass spectrometryOrganismsComputational BiologyProteinsRNA virusPlant Pathologybiology.organism_classificationGene regulationRepressor Proteins030104 developmental biologyU30 Research methodsAnimal StudiesRNAGene expression010606 plant biology & botanyF30 Plant genetics and breeding
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An exhaustive phylogeny of the combtooth blenny genus Salaria (Pisces, Blenniidae) shows introgressive hybridization and lack of reciprocal mtDNA mon…

2019

A comprehensive phylogeny of the genus Salaria based on mitochondrial and nuclear markers grouped the extant species of the genus in well-characterised marine and freshwater clades, thus rejecting the hypothesis of a polytypic origin of the freshwater Salaria populations and supporting the occurrence of a single invasion event of the inland waters by the genus. Based on both mitochondrial and nuclear DNA datasets, the Salaria species of the freshwater clade proved to be vicariant taxa originating from a common ancestor which could possibly spread throughout the circum-Mediterranean inland waters during the late Miocene Messinian salinity crisis, then experiencing a process of allopatric dif…

0106 biological sciences0301 basic medicineSalariaAquatic OrganismsMito-nuclear discordance Speciation without monophyly Introgressive hybridization Asymmetrical mtDNA introgressionCombtooth blennySettore BIO/05 - ZoologiaAllopatric speciation010603 evolutionary biology01 natural sciencesDNA barcodingDNA MitochondrialEvolution Molecular03 medical and health sciencesMonophylySpecies SpecificityGenusAsymmetrical mtDNA introgressionGeneticsAnimalsCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyCell NucleusbiologyPhylogenetic treeGeographyBayes Theorembiology.organism_classificationIntrogressive hybridizationMitochondriaPerciformesSpeciation without monophyly030104 developmental biologyHaplotypesEvolutionary biologyHybridization GeneticMito-nuclear discordanceMolecular phylogenetics and evolution
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Technical Note on the quality of DNA sequencing for the molecular characterisation of genetically modified plants

2018

Abstract As part of the risk assessment (RA) requirements for genetically modified (GM) plants, according to Regulation (EU) No 503/2013 and the EFSA guidance on the RA of food and feed from GM plants (EFSA GMO Panel, 2011), applicants need to perform a molecular characterisation of the DNA sequences inserted in the GM plant genome. The European Commission has mandated EFSA to develop a technical note to the applicants on, and checking of, the quality of the methodology, analysis and reporting covering complete sequencing of the insert and flanking regions, insertion site analysis of the GM event, and generational stability and integrity. This Technical Note puts together requirements and r…

0106 biological sciences0301 basic medicineVeterinary (miscellaneous)[SDV]Life Sciences [q-bio]2405 Parasitologymolecularcharacterisationnext‐generation sequencingContext (language use)Plant ScienceComputational biologyGenetically modified cropsBiology01 natural sciencesMicrobiologyGenomeInsert (molecular biology)DNA sequencing03 medical and health sciencessymbols.namesake1110 Plant Sciencegenetically modified organismgenetic stabilityDNA sequencing1106 Food ScienceSanger sequencinggenetically modified organisms2404 Microbiologyrisk assessmentmolecular characterisation10079 Institute of Veterinary Pharmacology and ToxicologyGenetically modified organism3401 Veterinary (miscellaneous)Scientific Opinion030104 developmental biologyNGSsymbols570 Life sciences; biologyAnimal Science and ZoologyParasitologynext-generation sequencing1103 Animal Science and Zoology010606 plant biology & botanyFood ScienceVerification and validation
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